Package: oxcAAR 1.1.1

Hinz Martin

oxcAAR: Interface to 'OxCal' Radiocarbon Calibration

A set of tools that enables using 'OxCal' from within R. 'OxCal' (<https://c14.arch.ox.ac.uk/oxcal.html>) is a standard archaeological tool intended to provide 14C calibration and analysis of archaeological and environmental chronological information. 'OxcAAR' allows simple calibration with 'Oxcal' and plotting of the results as well as the execution of sophisticated ('OxCal') code and the import of the results of bulk analysis and complex Bayesian sequential calibration.

Authors:Hinz Martin [aut, cre], Clemens Schmid [aut], Daniel Knitter [aut], Carolin Tietze [aut]

oxcAAR_1.1.1.tar.gz
oxcAAR_1.1.1.zip(r-4.5)oxcAAR_1.1.1.zip(r-4.4)oxcAAR_1.1.1.zip(r-4.3)
oxcAAR_1.1.1.tgz(r-4.4-any)oxcAAR_1.1.1.tgz(r-4.3-any)
oxcAAR_1.1.1.tar.gz(r-4.5-noble)oxcAAR_1.1.1.tar.gz(r-4.4-noble)
oxcAAR_1.1.1.tgz(r-4.4-emscripten)oxcAAR_1.1.1.tgz(r-4.3-emscripten)
oxcAAR.pdf |oxcAAR.html
oxcAAR/json (API)

# Install 'oxcAAR' in R:
install.packages('oxcAAR', repos = c('https://isaakiel.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/isaakiel/oxcaar/issues

On CRAN:

29 exports 21 stars 2.32 score 9 dependencies 50 scripts 238 downloads

Last updated 2 years agofrom:8cf23dd97d. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 12 2024
R-4.5-winOKSep 12 2024
R-4.5-linuxOKSep 12 2024
R-4.4-winOKSep 12 2024
R-4.4-macOKSep 12 2024
R-4.3-winOKSep 12 2024
R-4.3-macOKSep 12 2024

Exports:Boundarycalcurve_plotexecuteOxcalScriptget_bpget_cal_curveget_nameget_posterior_probabilitiesget_posterior_sigma_rangesget_raw_probabilitiesget_sigma_rangesget_stdget_tidy_oxcalresultis.oxcAARCalibratedDateis.oxcAARCalibratedDatesListoxcAARCalibratedDateoxcal_SumoxcalCalibrateoxcalSimulateoxcalSumSimparseFullOxcalOutputparseOxcalOutputPhasequickSetupOxcalR_DateR_SimulatereadOxcalOutputSequencesetOxcalExecutablePathwrap_in_boundaries

Dependencies:cligluejsonlitelifecyclemagrittrrlangstringistringrvctrs

Basic Usage

Rendered frombasic-usage.Rmdusingknitr::rmarkdownon Sep 12 2024.

Last update: 2021-07-05
Started: 2015-09-15

Readme and manuals

Help Manual

Help pageTopics
Returns the Oxcal code for a BoundaryBoundary
Plots calibrated dates on the calibration curvecalcurve_plot
Executes an Oxcal ScriptexecuteOxcalScript
get bp values (ages)get_bp get_bp.default get_bp.oxcAARCalibratedDate get_bp.oxcAARCalibratedDatesList
get calibration curve namesget_cal_curve get_cal_curve.default get_cal_curve.oxcAARCalibratedDate get_cal_curve.oxcAARCalibratedDatesList
get names (labcodes)get_name get_name.default get_name.oxcAARCalibratedDate get_name.oxcAARCalibratedDatesList
get posterior raw probabilitiesget_posterior_probabilities get_posterior_probabilities.default get_posterior_probabilities.oxcAARCalibratedDate get_posterior_probabilities.oxcAARCalibratedDatesList
get posterior sigma rangesget_posterior_sigma_ranges get_posterior_sigma_ranges.default get_posterior_sigma_ranges.oxcAARCalibratedDate get_posterior_sigma_ranges.oxcAARCalibratedDatesList
get raw probabilitiesget_raw_probabilities get_raw_probabilities.default get_raw_probabilities.oxcAARCalibratedDate get_raw_probabilities.oxcAARCalibratedDatesList
get sigma rangesget_sigma_ranges get_sigma_ranges.default get_sigma_ranges.oxcAARCalibratedDate get_sigma_ranges.oxcAARCalibratedDatesList
get std values (standard deviations)get_std get_std.default get_std.oxcAARCalibratedDate get_std.oxcAARCalibratedDatesList
tidy outputget_tidy_oxcalresult get_tidy_oxcalresult.default get_tidy_oxcalresult.oxcAARCalibratedDate get_tidy_oxcalresult.oxcAARCalibratedDatesList
Checks if a variable is of class oxcAARCalibratedDateis.oxcAARCalibratedDate
Checks if a variable is of class oxcAARCalibratedDatesListis.oxcAARCalibratedDatesList
oxcAAR Calibrated Dates ObjectoxcAARCalibratedDate
oxcAAR Calibrated Dates ListoxcAARCalibratedDatesList
Wraps an Oxcal string into a Oxcal sum functionoxcal_Sum
Calibrates a 14C date using oxcaloxcalCalibrate
Simulates 14C dates using oxcaloxcalSimulate
Sum calibration for simulated datesoxcalSumSim
Parses an Oxcal Output File completely into RparseFullOxcalOutput
Parses an Oxcal Output File into RparseOxcalOutput
Returns the Oxcal code for PhasePhase
Quick OxCal setupquickSetupOxcal
Returns the Oxcal code for the calibration of 14C datesR_Date
Returns the Oxcal code for the simulation of 14C datesR_Simulate
Reads the content of the Oxcal js output filereadOxcalOutput
Returns the Oxcal code for SequenceSequence
Setting the Oxcal program path for further usesetOxcalExecutablePath
Wrap OxCal commands in Boundary commandswrap_in_boundaries