Package: oxcAAR 1.1.1
Hinz Martin
oxcAAR: Interface to 'OxCal' Radiocarbon Calibration
A set of tools that enables using 'OxCal' from within R. 'OxCal' (<https://c14.arch.ox.ac.uk/oxcal.html>) is a standard archaeological tool intended to provide 14C calibration and analysis of archaeological and environmental chronological information. 'OxcAAR' allows simple calibration with 'Oxcal' and plotting of the results as well as the execution of sophisticated ('OxCal') code and the import of the results of bulk analysis and complex Bayesian sequential calibration.
Authors:
oxcAAR_1.1.1.tar.gz
oxcAAR_1.1.1.zip(r-4.5)oxcAAR_1.1.1.zip(r-4.4)oxcAAR_1.1.1.zip(r-4.3)
oxcAAR_1.1.1.tgz(r-4.4-any)oxcAAR_1.1.1.tgz(r-4.3-any)
oxcAAR_1.1.1.tar.gz(r-4.5-noble)oxcAAR_1.1.1.tar.gz(r-4.4-noble)
oxcAAR_1.1.1.tgz(r-4.4-emscripten)oxcAAR_1.1.1.tgz(r-4.3-emscripten)
oxcAAR.pdf |oxcAAR.html✨
oxcAAR/json (API)
| # Install 'oxcAAR' in R: |
| install.packages('oxcAAR', repos = c('https://isaakiel.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/isaakiel/oxcaar/issues
Last updated 2 years agofrom:8cf23dd97d. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 13 2024 |
| R-4.5-win | OK | Nov 13 2024 |
| R-4.5-linux | OK | Nov 13 2024 |
| R-4.4-win | OK | Nov 13 2024 |
| R-4.4-mac | OK | Nov 13 2024 |
| R-4.3-win | OK | Nov 13 2024 |
| R-4.3-mac | OK | Nov 13 2024 |
Exports:Boundarycalcurve_plotexecuteOxcalScriptget_bpget_cal_curveget_nameget_posterior_probabilitiesget_posterior_sigma_rangesget_raw_probabilitiesget_sigma_rangesget_stdget_tidy_oxcalresultis.oxcAARCalibratedDateis.oxcAARCalibratedDatesListoxcAARCalibratedDateoxcal_SumoxcalCalibrateoxcalSimulateoxcalSumSimparseFullOxcalOutputparseOxcalOutputPhasequickSetupOxcalR_DateR_SimulatereadOxcalOutputSequencesetOxcalExecutablePathwrap_in_boundaries
Dependencies:cligluejsonlitelifecyclemagrittrrlangstringistringrvctrs
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Returns the Oxcal code for a Boundary | Boundary |
| Plots calibrated dates on the calibration curve | calcurve_plot |
| Executes an Oxcal Script | executeOxcalScript |
| get bp values (ages) | get_bp get_bp.default get_bp.oxcAARCalibratedDate get_bp.oxcAARCalibratedDatesList |
| get calibration curve names | get_cal_curve get_cal_curve.default get_cal_curve.oxcAARCalibratedDate get_cal_curve.oxcAARCalibratedDatesList |
| get names (labcodes) | get_name get_name.default get_name.oxcAARCalibratedDate get_name.oxcAARCalibratedDatesList |
| get posterior raw probabilities | get_posterior_probabilities get_posterior_probabilities.default get_posterior_probabilities.oxcAARCalibratedDate get_posterior_probabilities.oxcAARCalibratedDatesList |
| get posterior sigma ranges | get_posterior_sigma_ranges get_posterior_sigma_ranges.default get_posterior_sigma_ranges.oxcAARCalibratedDate get_posterior_sigma_ranges.oxcAARCalibratedDatesList |
| get raw probabilities | get_raw_probabilities get_raw_probabilities.default get_raw_probabilities.oxcAARCalibratedDate get_raw_probabilities.oxcAARCalibratedDatesList |
| get sigma ranges | get_sigma_ranges get_sigma_ranges.default get_sigma_ranges.oxcAARCalibratedDate get_sigma_ranges.oxcAARCalibratedDatesList |
| get std values (standard deviations) | get_std get_std.default get_std.oxcAARCalibratedDate get_std.oxcAARCalibratedDatesList |
| tidy output | get_tidy_oxcalresult get_tidy_oxcalresult.default get_tidy_oxcalresult.oxcAARCalibratedDate get_tidy_oxcalresult.oxcAARCalibratedDatesList |
| Checks if a variable is of class oxcAARCalibratedDate | is.oxcAARCalibratedDate |
| Checks if a variable is of class oxcAARCalibratedDatesList | is.oxcAARCalibratedDatesList |
| oxcAAR Calibrated Dates Object | oxcAARCalibratedDate |
| oxcAAR Calibrated Dates List | oxcAARCalibratedDatesList |
| Wraps an Oxcal string into a Oxcal sum function | oxcal_Sum |
| Calibrates a 14C date using oxcal | oxcalCalibrate |
| Simulates 14C dates using oxcal | oxcalSimulate |
| Sum calibration for simulated dates | oxcalSumSim |
| Parses an Oxcal Output File completely into R | parseFullOxcalOutput |
| Parses an Oxcal Output File into R | parseOxcalOutput |
| Returns the Oxcal code for Phase | Phase |
| Quick OxCal setup | quickSetupOxcal |
| Returns the Oxcal code for the calibration of 14C dates | R_Date |
| Returns the Oxcal code for the simulation of 14C dates | R_Simulate |
| Reads the content of the Oxcal js output file | readOxcalOutput |
| Returns the Oxcal code for Sequence | Sequence |
| Setting the Oxcal program path for further use | setOxcalExecutablePath |
| Wrap OxCal commands in Boundary commands | wrap_in_boundaries |
